Wildfire is an important ecological process in California, where a diversity of fire regimes shape the structure and composition of plant and animal communities. Fire regimes are changing beyond their historical range of variability, however, due to several factors, including past fire management, invasive species, land use change, and climate change. These changes not only threaten the integrity and diversity of biological communities, but affect human communities, too, as residential losses to wildfire have skyrocketed in the last several decades. Two of these drivers, land use and climate, are expected to change dramatically in the coming century, raising substantial concern about their effects on fire regimes and subsequent impacts to human communities and biological diversity.
CBI has partnered with University of California, Berkeley to develop and implement a scenario-based integrated modeling framework to quantify the relative importance of climatic and land use factors on current and future projected fire patterns and risk of structure loss for three study areas in California. Select research questions driving this project include:
1) How do patterns of fire activity vary by land use change and climate?
2) How does structure loss vary by land use and climate change?
3) How do these relationships varyby geographic region?
4) Given these relationships, how are large fires and associated structure risk likely to change in the future?
Results of the assembled model output will be distributed to appropriate stakeholders and Data Basin will host the mapped output data.


CBI will use the San Diego Monitoring and Management Program’s Inspect and Manage rare plant monitoring protocol to document rare plant species population size, spatial extent, and threats and will make management recommendations based on the identified threats. The Cooperative Agreement has the potential to extend through 2023 and supports several objectives listed in the Naval Base Point Loma and Naval Base Coronado’s Integrated Natural Resources Plan.
CBI is collaborating with the United States Department of Agriculture (USDA) and the Farm Service Agency to produce an online application depicting ecological and economic features across Bottomland Hardwood Forest Conservation Reserve Program lands in the state of Mississippi. The Conservation Reserve Program (CRP) pays landowners to maintain these Bottomland Hardwood Forests providing important ecological benefits such as removing nitrogen and phosphorus from water, storing flood waters and reducing downstream flooding, trapping sediment, and promoting carbon sequestration. These benefits provided by the CRP are in addition to the restoration and enhancement of wetlands and wildlife habitat. The key ecological and economic features across these CRP lands will be estimated using remote sensing satellite imagery from the Sentinel satellite platform and machine learning modeling using a random forest approach. Additionally CBI staff will be conducting on the ground assessments of the ecological metrics during the 2019 field season.
By providing an online platform that provides metrics on these CRP lands, the USDA Farm Service Agency will be able to better monitor and evaluate existing acres of Bottomland Hardwood Forests that are part of the Conservation Reserve Program. This project is a pilot to determine the utility of the online platform and remote sensing methods, which if proven useful can be expanded to all regions where the CRP restores and enhances Bottomland Hardwood Forests.
The Random Forest modelling process was used to estimate various forest biometric measurements like biomass, density, height, etc., for CRP lands in Mississippi. These were also converted to economic values using standard procedures. We used Forest Inventory and Assessment (FIA) as training data and used field samples to augment the validation of the modelling process. Predicated outputs collected All these outputs were spatialized and incorporated into a customized tool for the USDA Conservation Reserve program.
The CRP tool allows USDA staff, land owners, and third-party organizations to view pertinent spatial information and guide decision making in relation to the status of CRP farms in Mississippi state. This tool allows one to summarize, filter and compare CRP farm tracts across counties and watersheds. You can also download reports in either of two appropriate formats (PDF or CSV). We have also included three different base layers, and relevant contextual data layers that you can view in relation to the CRP farm tracts. You will need permission from USDA to use the tool, but it is available at www.crptool.org. Anyone can view the design of the tool at https://www.sketch.com/s/feba6e2a-ff3e-4c3c-8d2d-9ea4f6bdc896.
CBI initially developed predictive maps of tree height, tree density, biomass, basal area, and forest type using Random Forest machine learning models. Numerous satellite-derived indices from the European Space Agency’s (ESA) Sentinel-1 and Sentinel-2 sensors, in addition to soils and topography data, were used as predictor inputs. We then refined these predictive models, focusing primarily on biomass improvements, by implementing new methods for processing Sentinel-1 imagery on the cloud computing platform Google Earth Engine (GEE); significantly updating model code; and incorporating preliminary data products derived from NASA’s spaceborne LiDAR mission – the Global Ecosystem Dynamics Investigation (GEDI). We refined the GEDI LiDAR-derived data products and included them in our models, and overall accuracy for the four forest regression models ranged from 57% to 91%. The Biomass model saw the greatest improvement in accuracy with the R2 increasing by 8%, from 49% to 57%. The Basal Area and Tree Height models both had minor 1-2% increases in accuracy, while the Tree Density model had no improvement. The Forest Type classification model had a negligible improvement in overall accuracy, however, the Elm/Ash/Cottonwood class increased in accuracy by ~6%, from 64% to 70%.
You can get more details in this publication. Degagne, R., Pizzino, D., Friedrich, H, Gough, M., Joseph, G., Iovanna, R., Smith, C. and Strittholt, J. 2022. Mississippi CRP Forest Remote Sensing with Preliminary Global Ecosystem and Dynamics (GEDI) Mission Derived Data Products. CBI Technical Report 2022-1. 40 pp. (10.6084/m9.figshare.19142147)
Wildfires are becoming larger and more severe, causing negative impacts on our natural ecosystems. These post-fire impacts include invasions of exotic plants and an increase in the risk of mudslides, erosion, and siltation of important stream habitat. It is a daunting challenge for resource managers to determine where restoration can do the most good.
In this pilot project, CBI worked with the Santa Barbara Botanic Garden to develop and test online software coupled with a citizen-science process that helps resource managers identify the best candidate locations for restoration in the aftermath of the Thomas and Whittier Fires in Santa Barbara County.
Spatial data about the landscape are combined in a model that provides a preliminary prioritization map, which is then refined using field observations of professionals and community scientists in the Spring following a fire. The sites can then be visited in person to make the final decision about where to focus restoration efforts to maximize the return on the investment.
Figure 1. A flow chart displaying the steps involved in prioritizing areas for post-fire restoration
The community scientists used iNaturalist to record their observations and assist in identifications. You can see the more than 5,000 observations collected so far on iNaturalist here!
How You Can Learn More :
Watch this short video about the project.
View the model with prioritized restoration locations here.
Explore the restoration prioritization map together with other important data layers and photographs in Data Basin.
Read more technical details in this article.
Email john.gallo@consbio.org to be notified of community science opportunities when they arise.



The Stephens’ kangaroo rat (Dipodomys stephensi) is an endangered mammal of grassland habitats in southern California. CBI is helping to conserve the species using satellite technology and advanced mapping techniques.
Kangaroo rats (or Krats, as biologists often call them) are seed-eating rodents restricted to arid regions of southwestern North America. The 20 or so Krat species are biologically similar to jerboas of the Mideast–and like mideastern jerboas and the kangaroos of Australia, they use their large hind limbs to bound efficiently and elusively through open habitats, especially deserts and grasslands. Being mostly nocturnal, Krats also have huge eyes for night vision and keen ears for hearing predators, like owls and foxes.
Stephens’ kangaroo rat (or biological shorthand, SKR) occupies open, undeveloped grasslands in western Riverside and San Diego counties in southern California. Because much of their habitat has been paved over and fragmented by development, the SKR was listed as Endangered under the the US Endangered Species Act and Threatened under the California ESA in the 1980s. Numerous ecological reserves have since been established to conserve remaining populations. Unfortunately, these scattered Krat reserves are not consistently managed, monitored, or even understood by the responsible resource management agencies, largely because it is difficult to map and track suitable habitat conditions over space and time. Traditional habitat variables, such as vegetation and soil types, are not nuanced enough to reflect the on-ground conditions that SKR need, and management and monitoring approaches differ amongst the reserves.
CBI is helping remedy this situation by using satellite imagery and innovative habitat modeling techniques to develop reliable statistical models to map habitat suitability across the species’ geographic range. In partnership with the US Fish and Wildlife Service, the Riverside County Habitat Conservation Agency (RCHCA), and species experts, we are developing a coordinated approach to mapping SKR habitat suitability to manage and monitor the species in a more scientifically consistent and justified manner. Specifically, we are using European Sentinel-2 satellite imagery, in concert with other reliable geographic data, to develop habitat suitability maps that can be routinely updated over time across the species range as conditions change. The resulting models will be used to inform management and monitoring efforts to conserve and recover this charismatic endangered species.
CBI has partnered with the Paulson Institute (PI), the Foreign Economic Cooperation Office (FECO) of the Ministry of Environmental Protection of China (MEP), and the State of California to provide FECO with an Environmental Risk Screening Tool that will help guide Chinese international investment projects. The overarching goal of the tool is to significantly reduce negative environmental impacts as the result of Chinese development projects around the world.
The screening tool will include interactive mapping of biodiversity and environmental data against which potential development projects can be evaluated. The tool will include a standard Biodiversity Impact Analysis using a set of internationally recognized datasets (e.g., Key Biodiversity Areas, Critical Natural Habitat, Alliance for Zero Extinction sites, and Protected Areas). The tool will also include regional and country-level biodiversity and environmental data in priority countries. The tool is not available for viewing at present. But here is a powerpoint describing its capabilities.
CBI is supporting the U.S. Forest Service (USFS) as it works to develop a strategic, comprehensive approach for conducting inventory, monitoring, and assessments that respond to the priorities of the whole agency instead of individual or programmatic needs. Many of today’s management decisions require a landscape approach to acquiring and analyzing information about forests and rangelands. Therefore an effective inventory, monitoring and assessment system requires working across organizational boundaries to determine common goals, avoid duplication and build on common information needs. CBI will assess existing data collection, management and storage methods of the USFS and make recommendations regarding the relationship agency data has with current decision support processes. This work was completed for The Wayne National Forest in Ohio and is in process of completion for the Salmon-Challis National Forest in Idaho.


CBI is supporting the U.S. Forest Service (USFS) in its work to develop a strategic, comprehensive approach for conducting inventory, monitoring, and assessments that respond to the priorities of the whole agency instead of individual or programmatic needs. Many of today’s management decisions require a landscape approach to acquiring and analyzing information about forests and rangelands. Therefore an effective inventory, monitoring and assessment system requires working across organizational boundaries to determine common goals, avoid duplication and build on common information needs. CBI will provide support to assess existing data collection, management and storage methods for the USFS Region 8 and make recommendations regarding the relationship agency data has with current decision support processes.
While the U.S. Forest Service National Forest Review projects are focused at the individual Forest level, the Census of Inventory, Monitoring, and Assessment Activities is focused on Region 8, which encompasses 15 Forests and covers 13 states in the southeastern United States.
